Between the extensive water damage, the fact that there was a small army of mice that chewed through most of the wiring to make homes in the walls, and the moldy insulation covering every inch of stripped wire, we made the decision to scrap it all and start from scratch. With all the inside skins off, we would never have better access than we do now.
It is amazing the difference it made to get rid of those wires. Alice looks so much cleaner now and we are almost to our blank slate.
Next, we just need to finish up waterproofing (including around the doors and windows), do another water test and then we are ready to remove the rotted out subfloor!